Below are the published assemblies for sunflower line HA412-HO. Note that the 'bronze-pseudomolecules' assembly is the annotated version available for download. Note the references for each data source at the bottom of the page.
| Release version | Description | Download |
|---|---|---|
| HA412HO v2.0 Latest Version | Assembled chromosomes in FASTA format (not including organelles) | Download |
| HA412HO v2.0 Latest Version | MD5 checksum of HA412HO v2.0 assembly FASTA file | Download |
| HA412HO v1.1 | Assembled pseudomolecules in FASTA format (not including organelles or concatenated unplaced contigs) | Download |
| HA412HO v1.1 | MD5 checksum of FASTA file | Download |
| HA412HO v1.1 | Assembled organelles and rDNA in FASTA format | Download |
| HA412HO v1.1 | MD5 checksum of FASTA file | Download |
| HA412HO v1.0 | Assembled pseudomolecules in FASTA format | Download |
| HA412HO v1.0 | MD5 checksum of FASTA file | Download |
Below are the published assemblies for sunflower line PSC8. Note the references for each data source at the bottom of the page.
Below are the unpublished assemblies for wild sunflower.
| Release version | Description | Download |
|---|---|---|
| Hanom V1.0 | Assembled chromosomes of H. anomalus in FASTA format (not including organelles) | Download |
| Hanom V1.0 | MD5 checksum of FASTA file | Download |
| HargH1 V1.0 | Assembled chromosomes of H. argophyllus (Haplotype 1) in FASTA format (not including organelles) | Download |
| HargH1 V1.0 | MD5 checksum of FASTA file | Download |
| HargH2 V1.0 | Assembled chromosomes of H. argophyllus (Haplotype 2) in FASTA format (not including organelles) | Download |
| HargH2 V1.0 | MD5 checksum of FASTA file | Download |
| HdesH1 V1.0 | Assembled chromosomes of H. deserticola (Haplotype 1) in FASTA format (not including organelles) | Download |
| HdesH1 V1.0 | MD5 checksum of FASTA file | Download |
| HdesH2 V1.0 | Assembled chromosomes of H. deserticola (Haplotype 2) in FASTA format (not including organelles) | Download |
| HdesH2 V1.0 | MD5 checksum of FASTA file | Download |
| HnivH1 V1.0 | Assembled chromosomes of H. niveus (Haplotype 1) in FASTA format (not including organelles) | Download |
| HnivH1 V1.0 | MD5 checksum of FASTA file | Download |
| HnivH2 V1.0 | Assembled chromosomes of H. niveus (Haplotype 2) in FASTA format (not including organelles) | Download |
| HnivH2 V1.0 | MD5 checksum of FASTA file | Download |
References
- Huang K, Jahani M, Gouzy J, Legendre A Carrere S, Lázaro-Guevara JM et al. 2023. LH. The genomics of linkage drag in inbred lines of sunflower. Proc Natl Acad Sci U S A. 2023 Apr 4;120(14):e2205783119. doi: 10.1073/pnas.2205783119. PMID: 36972449
- Todesco, M. et al. 2020. Massive haplotypes underlie ecotypic differentiation in sunflowers. Nature. 2020 Aug;584(7822):602-607. doi: 10.1038/s41586-020-2467-6. PMID: 32641831
- Badouin H, Gouzy J, Grassa CJ, Murat F, Staton SE, et al. 2017. The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution. Nature 546(7656): 148-152.